I know this wasn't directed at me but the lines you quoted from the link you posted were from the State Department's deputy spokesman. What else is he going to say?
From the same link: “State searched the record systems and databases that would contain records showing that the specified individuals completed the mandatory training courses — if they in fact completed them,” stated Benjamin Mizer, the principal deputy assistant Attorney General, and Marcia Berman, the assistant director of the Federal Program Branch at the Justice Department, in their filing before Judge Leon.
the Bureau of Diplomatic Security is “the primary training institution for [State]” and would possess training records for Clinton and her aides. The SCI also “has access to SCI electronic training records.”
“If its search of STMS, the Cyber Security Administration database, and SCI electronic training records did not locate training certifications, then such courses were not completed,” both DOJ officials concluded.